ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR167
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCATGATCTA miRNA* GATCGTGCTGTGACAGTTTCACC mismatches: 1 bulges: 2 |
pre-miRNA
AGTCTGGTAGTTCGAGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTCTTGAACCAGCTAGCTTCCGCGGGGTGGTTAGATCGTGCTGTGA
CAGTTTCACCCTTTCCCTGTTGGGCACATGACAGAGAGC
dot-bracket secondary structure
..((((.....(((.(((((((((.(((((.(((((((((.(((((((((((((((.....(((.((........))..))))))))))))))))))...
))))))))).))))).))..))))))).)))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
AGTCTGGTAGTTCGAGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTCTTGAACCAGCTAGCTTCCGCGGGGTGGTTAGATCGTGCTGTGA
CAGTTTCACCCTTTCCCTGTTGGGCACATGACAGAGAGC
dot-bracket secondary structure
..((((.....(((.(((((((((.(((((.(((((((((.(((((((((((((((.....(((.((........))..))))))))))))))))))...
))))))))).))))).))..))))))).)))))))....
SIMILARITIES| miRBase osa-MIR167b: 1e-16 PMRD osa-miR167b: 1e-16 microPC miR167: 0.00003 | UniProt no hits RFAM MIR167_1: 0.0000000000005 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
