ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCTCAGTCCCAAAATAAGTGT miRNA* ACTTATTTTGGGACGGAGGGA mismatches: 1 bulges: 0 |
pre-miRNA
TTCAACTATTCCCTCAGTCCCAAAATAAGTGTCTCAACTTTGTACTAGCTCTAGTACAAATTTGTACTAAGCTCAAGACACTTATTTTGGGACGGAGGGA
GTATATGC
dot-bracket secondary structure
......(((((((((.(((((((((((((((((((((.(((((((((....))))))))).)))...........)))))))))))))))))).))))))
))).....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTCAACTATTCCCTCAGTCCCAAAATAAGTGTCTCAACTTTGTACTAGCTCTAGTACAAATTTGTACTAAGCTCAAGACACTTATTTTGGGACGGAGGGA
GTATATGC
dot-bracket secondary structure
......(((((((((.(((((((((((((((((((((.(((((((((....))))))))).)))...........)))))))))))))))))).))))))
))).....
SIMILARITIES| miRBase osa-MIR1862e: 0.000005 PMRD hpr-miR1120: 0.00000008 microPC miR1439: 3e-29 | UniProt no hits RFAM MIR1122: 4e-38 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
