ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACTACTTCCTCTGTCCCAAA miRNA* TGGGACCGAGGGAGTATCTGC mismatches: 4 bulges: 0 |
pre-miRNA
TCATTGCTATATACTACTTCCTCTGTCCCAAAATAAGTATCTCAACTTTAGTATAACTTTGTACTAACTTTAGTACAAAGTTGAGACACTTATTTGGGAC
CGAGGGAGTATCTGCCAAATATG
dot-bracket secondary structure
..............(((((((((.((((((((.(((((.((((.((....))..((((((((((((....)))))))))))))))).)))))))))))))
.))))))))).............
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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TCATTGCTATATACTACTTCCTCTGTCCCAAAATAAGTATCTCAACTTTAGTATAACTTTGTACTAACTTTAGTACAAAGTTGAGACACTTATTTGGGAC
CGAGGGAGTATCTGCCAAATATG
dot-bracket secondary structure
..............(((((((((.((((((((.(((((.((((.((....))..((((((((((((....)))))))))))))))).)))))))))))))
.))))))))).............
SIMILARITIES| miRBase tae-MIR1137: 0.0000004 PMRD hpr-miR1120: 0.00000002 microPC miR1439: 1e-19 | UniProt no hits RFAM MIR1122: 8e-18 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
