ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGTACAAAGTTGGGTCATCT miRNA* ATAATCCAACTTTTATACTAAA mismatches: 2 bulges: 1 |
pre-miRNA
GACTTCCTCCGTTCCAAAATAGATAATCCAACTTTTATACTAAAATTAGTACAAAGTTGGGTCATCTATTTTGAAACGGATGGAGT
dot-bracket secondary structure
.(((((.((((((.((((((((((.((((((((((..(((((....))))).)))))))))).)))))))))).)))))).)))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GACTTCCTCCGTTCCAAAATAGATAATCCAACTTTTATACTAAAATTAGTACAAAGTTGGGTCATCTATTTTGAAACGGATGGAGT
dot-bracket secondary structure
.(((((.((((((.((((((((((.((((((((((..(((((....))))).)))))))))).)))))))))).)))))).)))))
SIMILARITIES| miRBase tae-MIR1137: 0.000000000004 PMRD tae-miR1137: 0.000000000004 microPC miR1439: 0.00000000000007 | UniProt no hits RFAM MIR1122: 5e-18 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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