ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACTCCCTCCGTCCTATAATTT miRNA* GTAATGGGACGGAGGGAGTTT mismatches: 3 bulges: 0 |
pre-miRNA
TCCGTCTAATATTTAGTAACTACTCCCTCCGTCCTATAATTTAGGACGTAATGGGACGGAGGGAGTTTGAAACAAAGTACTGTACA
dot-bracket secondary structure
...((.((.(((((.((....((((((((((((((((.((.......)).)))))))))))))))).....)).))))).)).)).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCCGTCTAATATTTAGTAACTACTCCCTCCGTCCTATAATTTAGGACGTAATGGGACGGAGGGAGTTTGAAACAAAGTACTGTACA
dot-bracket secondary structure
...((.((.(((((.((....((((((((((((((((.((.......)).)))))))))))))))).....)).))))).)).)).
SIMILARITIES| miRBase no hits PMRD osa-miRf12035-akr: 0.001 microPC miR1436: 0.001 | UniProt no hits RFAM MIR1122: 0.000005 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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