ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTACTCCCTCCGTCCCACAAT miRNA* TATGGGACGGAGGGAGTATCT mismatches: 2 bulges: 0 |
pre-miRNA
TTGGTAATTCATTACTCCCTCCGTCCCACAATGAAAGACGTTTTTTGACACTAGTGTAGTGTCAAAAAACGTCTTACATTATGGGACGGAGGGAGTATCT
TTTTAGTT
dot-bracket secondary structure
............((((((((((((((((.((((.(((((((((((((((((((...))))))))))))))))))).)))).))))))))))))))))...
........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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TTGGTAATTCATTACTCCCTCCGTCCCACAATGAAAGACGTTTTTTGACACTAGTGTAGTGTCAAAAAACGTCTTACATTATGGGACGGAGGGAGTATCT
TTTTAGTT
dot-bracket secondary structure
............((((((((((((((((.((((.(((((((((((((((((((...))))))))))))))))))).)))).))))))))))))))))...
........
SIMILARITIES| miRBase tae-MIR1120: 0.000000005 PMRD tae-miR1120: 0.000000005 microPC miR1436: 2e-27 | UniProt no hits RFAM MIR1122: 3e-26 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
