miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST006361
species: Triticum aestivum
miRNA family: MIR1128
source: miRNEST

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGTACTCCCTCCGTCCGAAA

miRNA*
 TCAGACGGAGGGAAGTATTAAT

mismatches: 1
bulges: 1
View larger
pre-miRNA
 CCTAGTCGTGCTAGTACTCCCTCCGTCCGAAAAAACTTGTCTCAAGCTTGTTCCCTCAAATGAATGTATCTAGCACTAACTTGGTGCTAGATACATCCAT
TTGAGGGACAAGCTTTTTCAGACGGAGGGAAGTATTAATGAACGAGA

dot-bracket secondary structure
.....((((..((((((((((((((((.(((((...........(((((((.((((((((((.((((((((((((((.....)))))))))))))).)))
))))))))))))))))))).))))))))).)))))))....))))..


SIMILARITIES
miRBase tae-MIR1133: 1e-32

PMRD tae-miR1133: 1e-32

microPC miR1128: 0.000002		UniProt no hits

RFAM MIR1122: 1e-38		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;