ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCCTCTGTCCCAAAATAAGT miRNA* TTATTTTGGGACAGAGGAAGT mismatches: 1 bulges: 0 |
pre-miRNA
AATATACATACTCCCTCTGTCCCAAAATAAGTGTCTCAACTTTGCACTAACTTTAGTACAAAATTGTAATAAAGTTAAGACACTTATTTTGGGACAGAGG
AAGTATAAGCAA
dot-bracket secondary structure
.......(((((.(((((((((((((((((((((((...........((((((((.((((....)))).)))))))))))))))))))))))))))))))
.)))))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AATATACATACTCCCTCTGTCCCAAAATAAGTGTCTCAACTTTGCACTAACTTTAGTACAAAATTGTAATAAAGTTAAGACACTTATTTTGGGACAGAGG
AAGTATAAGCAA
dot-bracket secondary structure
.......(((((.(((((((((((((((((((((((...........((((((((.((((....)))).)))))))))))))))))))))))))))))))
.)))))......
SIMILARITIES| miRBase tae-MIR1137: 0.00000009 PMRD hpr-miR1120: 0.000000001 microPC miR1439: 1e-16 | UniProt no hits RFAM MIR1122: 1e-25 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
