ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1171
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAGTGGAGTGGACTGGAGT miRNA* TTTTTACTACTGTACTCTACT mismatches: 4 bulges: 0 |
pre-miRNA
TGCTCACCCAGTGGAGTGGAGTGGACTGGAGTGCTACTTTTTACTACTGTACTCTACTAGGTGTGG
dot-bracket secondary structure
....((((.(((((((((.(((((...(((((...)))))...))))).))))))))).))))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TGCTCACCCAGTGGAGTGGAGTGGACTGGAGTGCTACTTTTTACTACTGTACTCTACTAGGTGTGG
dot-bracket secondary structure
....((((.(((((((((.(((((...(((((...)))))...))))).))))))))).))))...
SIMILARITIES| miRBase cre-MIR1171: 0.0002 PMRD cre-miR1171: 0.0002 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
