ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTACTCCCTTCGTCCCATAAT miRNA* TATGGGACGGTGGTAGTAGTT mismatches: 3 bulges: 0 |
pre-miRNA
AGCTGTAAAACCTACTCCCTTCGTCCCATAATATAAGAACGTTTTTGACACTAGTGTAATGTCAAAAACGTTCTTATATTATGGGACGGTGGTAGTAGTT
TGTTGGCA
dot-bracket secondary structure
.((((..((((.((((.((.((((((((((((((((((((((((((((((.((...)).)))))))))))))))))))))))))))))).)).)))))))
)..)))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGCTGTAAAACCTACTCCCTTCGTCCCATAATATAAGAACGTTTTTGACACTAGTGTAATGTCAAAAACGTTCTTATATTATGGGACGGTGGTAGTAGTT
TGTTGGCA
dot-bracket secondary structure
.((((..((((.((((.((.((((((((((((((((((((((((((((((.((...)).)))))))))))))))))))))))))))))).)).)))))))
)..)))).
SIMILARITIES| miRBase tae-MIR1120: 6e-18 PMRD tae-miR1120: 6e-18 microPC miR1439: 0.00000000000002 | UniProt no hits RFAM MIR1122: 3e-26 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
