miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST006375
species:
Triticum aestivum
miRNA family:
MIR1439
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGGGACAGAGGGAGTACT
miRNA*
TACTCCCTGCGTCCCAAAATT
mismatches:
4
bulges:
0
View larger
pre-miRNA
TAGTAAATTTTTAATGTGTAT
TACTCCCTGCGTCCCAAAATT
CTTGTCTTATATTTGTCTAGATACGGATGTATCTAATAATAAAATGTGACTTGATACA
TTCGTATTTAGACAAATCTACGACAAAAA
TTTTGGGACAGAGGGAGTACT
TCATTATTAATAATTGGT
dot-bracket secondary structure
.....((((.((((((.(...
((((((((..(((((((((((
.(((((.((.(((((((((((((((((((((((.....((.....)).....))))))
))))))))))))))))).)).))))).))
)))))))))..))))))))..
.)..)))))).))))...
SIMILARITIES
miRBase
tae-MIR1122
:
1e-41
PMRD
tae-miR1122
:
1e-41
microPC
miR1122
:
0.000000000000002
UniProt
no hits
RFAM
MIR1122: 6e-41
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record