ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1439
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTTGGAACGGAGGGAGTATA miRNA* TACTCCCTTCGTTCCAAAGTA mismatches: 0 bulges: 0 |
pre-miRNA
TTTTTGACGGCCGGCAACTCCAAGATATACTCCCTTCGTTCCAAAGTAAGTGCCGTGGTTTTGATTCNATTTTGGAACGGAGGGAGTATATGTTTGGCCG
CCTTTGTCATTTGA
dot-bracket secondary structure
....((((((..(((....((((((((((((((((((((((((((((.(((............)))..))))))))))))))))))))))).)))))..)
)).)))))).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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TTTTTGACGGCCGGCAACTCCAAGATATACTCCCTTCGTTCCAAAGTAAGTGCCGTGGTTTTGATTCNATTTTGGAACGGAGGGAGTATATGTTTGGCCG
CCTTTGTCATTTGA
dot-bracket secondary structure
....((((((..(((....((((((((((((((((((((((((((((.(((............)))..))))))))))))))))))))))).)))))..)
)).)))))).....
SIMILARITIES| miRBase tae-MIR1137: 0.0003 PMRD tae-miR1137: 0.0003 microPC miR1439: 0.00009 | UniProt no hits RFAM MIR1122: 0.0001 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
