ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACTCCCTCCGTTCCATAATAT miRNA* ATTATGGGACGGAGGGAGTAG mismatches: 0 bulges: 0 |
pre-miRNA
GTTACTCCCTCCGTTCCATAATATAAGAGTGTTTTTGACACTAGTGTGTGTAAAAAACACTCTTATATTATGGGACGGAGGGAGTAG
dot-bracket secondary structure
..((((((((((((((((((((((((((((((((((.((((......)))).)))))))))))))))))))))))))))))))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTTACTCCCTCCGTTCCATAATATAAGAGTGTTTTTGACACTAGTGTGTGTAAAAAACACTCTTATATTATGGGACGGAGGGAGTAG
dot-bracket secondary structure
..((((((((((((((((((((((((((((((((((.((((......)))).)))))))))))))))))))))))))))))))))).
SIMILARITIES| miRBase hvu-MIR1120: 7e-17 PMRD tae-miR1120: 0.0000000000003 microPC miR1439: 0.00000000000002 | UniProt no hits RFAM MIR1122: 2e-23 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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