ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1436
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACATTATGGAACGGAGGGAGT miRNA* TCCCTCCGTCCCATAATGTAA mismatches: 1 bulges: 0 |
pre-miRNA
ATAATCACTCCCTCCGTCCCATAATGTAAGACGTTTTTTGTCAAAAAACGTCTTACATTATGGAACGGAGGGAGTACAAC
dot-bracket secondary structure
......(((((((((((.(((((((((((((((((((((...))))))))))))))))))))).))))))))))).....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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ATAATCACTCCCTCCGTCCCATAATGTAAGACGTTTTTTGTCAAAAAACGTCTTACATTATGGAACGGAGGGAGTACAAC
dot-bracket secondary structure
......(((((((((((.(((((((((((((((((((((...))))))))))))))))))))).))))))))))).....
SIMILARITIES| miRBase tae-MIR1130: 0.00000002 PMRD tae-miR1130: 0.00000002 microPC miR1436: 1e-33 | UniProt no hits RFAM MIR1122: 0.000000000005 | most similar mature miRNAs |
Identical with: miR1436 from microPC (MNEST045393) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
