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ABOUT THIS RECORD
ID:
MNEST006407
species:
Triticum aestivum
miRNA family:
MIR1439
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATTTGGAACGGAGGGAGTACG
miRNA*
TACTCCCTCCGTTCCCAATTA
mismatches:
1
bulges:
0
View larger
pre-miRNA
AGATGGCAGTGTTTCTAACTTG
TACTCCCTCCGTTCCCAATTA
CTTGTCTTAGATTTGTCTAGATACGGATGTATCTAGCATTAAAATGAGTCTAGATAC
ATCCGTATCTAGACAAATCCAAGACAAGTA
ATTTGGAACGGAGGGAGTACG
AGTACAATGGAATAGCAGG
dot-bracket secondary structure
........((..((((((((((
(((((((((((((((.(((((
((((((((.(((((((((((((((((((((((((((.(((......)))))))))))
))))))))))))))))))).))))))))))
))).)))))))))))))))))
)))....)))))..))...
SIMILARITIES
miRBase
tae-MIR1122
:
6e-16
PMRD
hpi-miR1122
:
3e-18
microPC
miR1122
:
1e-17
UniProt
no hits
RFAM
MIR1122: 5e-57
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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