ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCCCTCTGTAAACAAATATAA miRNA* ATATTAATTTACGGAGGGANG mismatches: 3 bulges: 0 |
pre-miRNA
TATGAGCTACTCCCCTCTGTAAACAAATATAAAAGCGTTTAGATCACTACTTTAGTGAACTAAACGCTCTCTTATATTAATTTACGGAGGGANGTAGAAT
TT
dot-bracket secondary structure
...((.((((..(((((((((((..(((((((.(((((((((.((((((...)))))).)))))))))...)))))))..)))))))))))..))))..)
).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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TATGAGCTACTCCCCTCTGTAAACAAATATAAAAGCGTTTAGATCACTACTTTAGTGAACTAAACGCTCTCTTATATTAATTTACGGAGGGANGTAGAAT
TT
dot-bracket secondary structure
...((.((((..(((((((((((..(((((((.(((((((((.((((((...)))))).)))))))))...)))))))..)))))))))))..))))..)
).
SIMILARITIES| miRBase tae-MIR1121: 0.000000000001 PMRD tae-miR1121: 0.000000000001 microPC miR1121: 0.00000000008 | UniProt no hits RFAM MIR1122: 3e-17 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
