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ABOUT THIS RECORD
ID:
MNEST006552
species:
Triticum aestivum
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CACATACTCCCTCCGTCCGGA
miRNA*
CGTACGGAGGGAGTACTAAAA
mismatches:
5
bulges:
0
View larger
pre-miRNA
CTTGCATAAAT
CACATACTCCCTCCGTCCGGA
AATACTTGTCATTGAGATGGATGTATCTAGATGTATTTTAGTTGTAGATACATCCATTTTCATTCATT
TTGATGACAAGTATTTC
CGTACGGAGGGAGTACTAAAA
AAAGTACA
dot-bracket secondary structure
...........
....((((((((((((.((((
(((((((((((((((((((((((......(((((((((.......)))))))))......))))))))
)))))))))))))))))
)).))))))))))))......
........
SIMILARITIES
miRBase
tae-MIR1128
:
9e-24
PMRD
tae-miR1128
:
9e-27
microPC
miR1133
:
1e-32
UniProt
no hits
RFAM
MIR1122: 5e-38
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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