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ABOUT THIS RECORD
ID:
MNEST006637
species:
Xenopus laevis
miRNA family:
miR-1369
source:
miRNEST
Taxonomy by NCBI:
Xenopus laevis
Xenopus
Xenopus
Xenopodinae
Pipidae
Pipoidea
Mesobatrachia
Anura
Batrachia
Amphibia
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGTGTGAGGAGGGAGAGACTT
miRNA*
TTCTGCTGCCCTTCTCATCCGAG
mismatches:
4
bulges:
2
View larger
pre-miRNA
ACTTTTGGCCA
TGTGTGAGGAGGGAGAGACTT
ACTGTCCTGAAGTAAAGGATGCAAAACAAGGCAAAAGCCTTGGAAAAATATGTATGAAATGCAAGGAA
AG
TTCTGCTGCCCTTCTCATCCGAG
CTGGAGAT
dot-bracket secondary structure
..(((((((..
((.(((((((((((((((...
(((.((((...(((....(((((...((((((....))))))........)))))....))).)))).
))
)))).)).)))))))))).)).)
))))))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q08B12|CTU2A_XENLA: 1e-17
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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