ABOUT THIS RECORD

ID: MNEST006640
species: Xenopus laevis
miRNA family: mir-133
source: miRNEST

Taxonomy by NCBI:
Xenopus laevis Xenopus Xenopus Xenopodinae Pipidae Pipoidea Mesobatrachia Anura Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
ATGCAATCCTACAGCTGGTTGAAGGGGACCAAATCCATTGAAGAGGTGATTTGGTTCCATTTTACCAGCTTTAGCAAAGCA

dot-bracket secondary structure
.(((....(((.(((((((.(((.(((((((((((.(((.....)))))))))))))).))).))))))).)))....)))


SIMILARITIES

miRBase xla-mir-133a: 9e-41 PMRD no hits microPC no hits

UniProt no hits RFAM mir-133: 1e-27

most similar mature miRNAs

Identical with: xtr-mir-133a from miRBase (MNEST025776)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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