miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST006653
species: Xenopus laevis
miRNA family: mir-1422
source: miRNEST

Taxonomy by NCBI:
Xenopus laevis Xenopus Xenopus Xenopodinae Pipidae Pipoidea Mesobatrachia Anura Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATGGAAAACTATGTGTTGTGC

miRNA*
CAAAATAAAGATTTCCATTA

mismatches: 3
bulges: 1

View larger
pre-miRNA
CTGGAGAACTGAAACTAAGAAATGGAAAACTATGTGTTGTGCAATTCAGCCTAAATATGTGCCGTGTACTTTGACTTCAATCTGTTTTATTCTGTAGCAT
GCATCATTCCATTGCCAAAATAAAGATTTCCATTAACTTAAAAAAAAAAAAAA


dot-bracket secondary structure
...............((((.((((((((.((.(((.(((.(((((...........((((((.((((((...((................)).))).)))
))).)))...)))))))).))).)).))))))))..)))).............



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;