ABOUT THIS RECORD

ID: MNEST006656
species: Xenopus laevis
miRNA family: mir-2238
source: miRNEST

Taxonomy by NCBI:
Xenopus laevis Xenopus Xenopus Xenopodinae Pipidae Pipoidea Mesobatrachia Anura Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
GACACGTTCCGGTCTTTCACTAATGTAAAGTGCAGATGGCGATTGAAGCTCTTCCTGACCTCGGAAACATCTCCCAGGCCGGCGATGCCCCTGACGCTGA
TCTGCTTCTTTTTGTCCGAGTCTGAGAGAGGGGTGG

dot-bracket secondary structure
..(((..(((..((((..(((.(((.((((.((((((((((.(((..((...(((((.(((.(((......))).))).))).)).))...))))))).)
)))))..)))).)))...)))..))))..)))))).


SIMILARITIES

miRBase no hits PMRD no hits microPC no hits

UniProt sp|Q5R5M6|PYGB_PONAB: 8e-16 RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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