ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: mir-449
source: miRNEST
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGGCAGTGTATTGTTAGTTAG miRNA* ACTAACTACACTGCCACA mismatches: 2 bulges: 2 |
pre-miRNA
CTAGTGCTGTGTGTGATGATTAGGCAGTGTATTGTTAGTTAGCTGCTCTTCATACACCAGCAACTAACTACACTGCCACATTAGCACATCACTGTGTC
dot-bracket secondary structure
.(((((.(((((.(((((....(((((((((..(((((((.((((............)))))))))))))))))))).)))))))))).)))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
CTAGTGCTGTGTGTGATGATTAGGCAGTGTATTGTTAGTTAGCTGCTCTTCATACACCAGCAACTAACTACACTGCCACATTAGCACATCACTGTGTC
dot-bracket secondary structure
.(((((.(((((.(((((....(((((((((..(((((((.((((............)))))))))))))))))))).)))))))))).)))))....
SIMILARITIES| miRBase mml-mir-449a: 0.0003 PMRD no hits microPC no hits | UniProt no hits RFAM mir-449: 1e-43 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
