ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: miR-3195
source: miRNEST
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGCGCCGGGCCCGGGGCTTCT miRNA* AAGCCCCCATCCCCGGCGCCGCT mismatches: 4 bulges: 2 |
pre-miRNA
TGTGGCGTACGGAAGCCCCCATCCCCGGCGCCGCTCTCGGGGGGCCCAAGTCCTTCTGATCGAGGCCCAGCCCGCGGACGGTGTGAGGCCGGTAGCGGCC
CCCCGGCGCGCCGGGCCCGGGGCTTCTCGGAGTCGG
dot-bracket secondary structure
..((((...((((((((((....((((((((.((...(((((((((.....((.((.....))((((..(((((....))).))..))))))....))))
)))))))))))))))...)))))))).))..)))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGTGGCGTACGGAAGCCCCCATCCCCGGCGCCGCTCTCGGGGGGCCCAAGTCCTTCTGATCGAGGCCCAGCCCGCGGACGGTGTGAGGCCGGTAGCGGCC
CCCCGGCGCGCCGGGCCCGGGGCTTCTCGGAGTCGG
dot-bracket secondary structure
..((((...((((((((((....((((((((.((...(((((((((.....((.((.....))((((..(((((....))).))..))))))....))))
)))))))))))))))...)))))))).))..)))).
SIMILARITIES| miRBase mmu-mir-5105: 3e-26 PMRD no hits microPC no hits | UniProt no hits RFAM SSU_rRNA_eukarya: 1e-50 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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