ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: miR-3523
source: miRNEST
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCGCGCAGTGCCTCGTCCTCGA miRNA* GAGTGCGAGGCGCTGCGGGGGCT mismatches: 4 bulges: 1 |
pre-miRNA
TGTGTGCGCTGGAGTGCGAGGCGCTGCGGGGGCTGCTGCAGGAGCGCGCCGCGCAGTGCCTCGTCCTCGACTGCCGCT
dot-bracket secondary structure
.(((.(((...(((.(((((((((((((..(((((((.....)))).))).))))))))))))).)))...)))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGTGTGCGCTGGAGTGCGAGGCGCTGCGGGGGCTGCTGCAGGAGCGCGCCGCGCAGTGCCTCGTCCTCGACTGCCGCT
dot-bracket secondary structure
.(((.(((...(((.(((((((((((((..(((((((.....)))).))).))))))))))))).)))...)))))).
SIMILARITIES| miRBase gga-mir-3523: 5e-39 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: gga-mir-3523 from miRBase (MNEST026356) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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