ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: miR-3529
source: miRNEST
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGGCAGACTGTGACTTGTTGT miRNA* AACAAAATCACTAGTCTTCCAGA mismatches: 3 bulges: 2 |
pre-miRNA
CCGGCGGGGCCGTGCGCCCTAAGGCAGACTGTGACTTGTTGTGGTGGGATGAGCCATACAACAACAAAATCACTAGTCTTCCAGAGGGCACCGCGGCCGT
CCT
dot-bracket secondary structure
..((...(((((((.(((((..((.(((((((((.(((((((.((((......))))...)))))))..)))).))))).))..)))))..)))))))..
)).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
deep sequencing data evidence
CCGGCGGGGCCGTGCGCCCTAAGGCAGACTGTGACTTGTTGTGGTGGGATGAGCCATACAACAACAAAATCACTAGTCTTCCAGAGGGCACCGCGGCCGT
CCT
dot-bracket secondary structure
..((...(((((((.(((((..((.(((((((((.(((((((.((((......))))...)))))))..)))).))))).))..)))))..)))))))..
)).
SIMILARITIES| miRBase gga-mir-7-2: 2e-51 PMRD no hits microPC no hits | UniProt no hits RFAM mir-7: 2e-45 | most similar mature miRNAs |
Identical with: gga-mir-7-2 from miRBase (MNEST025884) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
deep sequencing data evidence
