ABOUT THIS RECORD

ID: MNEST006749
species: Gallus gallus
miRNA family: miR-1580
source: miRNEST

Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
CAGATCTGGAATGTCGTCCTGTTACTGGGGAGCGTGGTTACAAGGGGAGCCTGGGGGGAAAGGAATGAAACCCGGCTTCTCGGTACCTGCGTTCACCAAA
GAGATCGTTTCAGCTGCTGCCC

dot-bracket secondary structure
(((..((((((((((...((.....(((.((((((((.(((..((((((((.(((...............))))))))))).))).)))))))).))).)
).)).))))))))...)))...


SIMILARITIES

miRBase gga-mir-1580: 2e-33 PMRD no hits microPC no hits

UniProt no hits RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
download this record
deep sequencing data evidence