ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: miR-1684
source: miRNEST
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAGTATGAGGAAATGGAGATC miRNA* GCTCTGCTTCCTCATACATAC mismatches: 3 bulges: 0 |
pre-miRNA
ATGGATCGGGTTTGAAAGGAGAGCTCTGCTTCCTCATACATACTCATCTTTTCTATGGATAAGTATGAGGAAATGGAGATCTCCTTCCATTCCACCTGTT
dot-bracket secondary structure
......(((((.((.(((((((.(((((.((((((((((.((.((((.......)))).)).)))))))))).))))).))))))).))....)))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
ATGGATCGGGTTTGAAAGGAGAGCTCTGCTTCCTCATACATACTCATCTTTTCTATGGATAAGTATGAGGAAATGGAGATCTCCTTCCATTCCACCTGTT
dot-bracket secondary structure
......(((((.((.(((((((.(((((.((((((((((.((.((((.......)))).)).)))))))))).))))).))))))).))....)))))..
SIMILARITIES| miRBase gga-mir-1684: 5e-49 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
