ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: miR-1684
source: miRNEST
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AACTATGAGGAAATGGAGATC miRNA* GCTCTGCTTACTCATACATAC mismatches: 5 bulges: 0 |
pre-miRNA
TAGCTGCCAAATGGATCGGGTTTGAAAGGAGAGCTCTGCTTACTCATACATACTCATCTTTTCTATGGATAACTATGAGGAAATGGAGATCTCCTTCCAT
TCCACCTGTTTTAAAAAGCT
dot-bracket secondary structure
.((((......((((.(((((.((.(((((((.(((((.((.((((((..((.((((.......)))).))..)))))).)).))))).))))))).)).
...))))).))))...))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TAGCTGCCAAATGGATCGGGTTTGAAAGGAGAGCTCTGCTTACTCATACATACTCATCTTTTCTATGGATAACTATGAGGAAATGGAGATCTCCTTCCAT
TCCACCTGTTTTAAAAAGCT
dot-bracket secondary structure
.((((......((((.(((((.((.(((((((.(((((.((.((((((..((.((((.......)))).))..)))))).)).))))).))))))).)).
...))))).))))...))))
SIMILARITIES| miRBase gga-mir-1684: 6e-46 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
