ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: mir-15
source: miRNEST
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGCAGCACATCATGGTTTGT miRNA* AGACCATTCTGGGCTGCCTCA mismatches: 5 bulges: 0 |
pre-miRNA
TCAGTGGGCTTTGAGGAGATGTAGCAGCACATCATGGTTTGTAGGGACAAGGAGATACAGACCATTCTGGGCTGCCTCATTACCTCAAGGATAAGAC
dot-bracket secondary structure
((..((..((((((((.((((..(((((.((..((((((((((............))))))))))..)).)))))..)))).)))))))).)).)).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCAGTGGGCTTTGAGGAGATGTAGCAGCACATCATGGTTTGTAGGGACAAGGAGATACAGACCATTCTGGGCTGCCTCATTACCTCAAGGATAAGAC
dot-bracket secondary structure
((..((..((((((((.((((..(((((.((..((((((((((............))))))))))..)).)))))..)))).)))))))).)).)).
SIMILARITIES| miRBase tgu-mir-15c: 3e-41 PMRD no hits microPC no hits | UniProt no hits RFAM mir-15: 3e-41 | most similar mature miRNAs |
Identical with: gga-mir-15c from miRBase (MNEST025893) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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