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ABOUT THIS RECORD
ID:
MNEST006812
species:
Gallus gallus
miRNA family:
miR-142
source:
miRNEST
Taxonomy by NCBI:
Gallus gallus
Gallus
Phasianinae
Phasianidae
Galliformes
Neognathae
Aves
Coelurosauria
Theropoda
Saurischia
Dinosauria
Archosauria
Sauria
Sauropsida
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGTGTTTCCTACTTTATGGAT
miRNA*
CCATAAAGTAGAAAGCACTAC
mismatches:
2
bulges:
0
View larger
pre-miRNA
ACTGAGAGACAGTGCAGTCAC
CCATAAAGTAGAAAGCACTAC
TAAACAGCACTGCAGGGTGT
AGTGTTTCCTACTTTATGGAT
GAGTGTACTGTGGGCTA
C
dot-bracket secondary structure
........((((((((.(((.
(((((((((((.(((((((((
...((.((...))...))))
))))))).))))))))))).)
)).))))))))......
.
SIMILARITIES
miRBase
gga-mir-142
:
8e-45
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-142: 2e-51
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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