ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: let-7
source: miRNEST
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AACTATACAACCTACTGCCTT miRNA* GGTAGTAGGTTGTGTGGTTTC mismatches: 0 bulges: 0 |
pre-miRNA
TCTAACAGGATGAGGTAGTAGGTTGTGTGGTTTCAGGGTAGTGATTTTGCCCCAATCAGGAGATAACTATACAACCTACTGCCTTCCCTGATAGG
dot-bracket secondary structure
((((.((((..(((((((((((((((((((((((.((((((.....)))))).......))...))))))))))))))))))))).)))).))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCTAACAGGATGAGGTAGTAGGTTGTGTGGTTTCAGGGTAGTGATTTTGCCCCAATCAGGAGATAACTATACAACCTACTGCCTTCCCTGATAGG
dot-bracket secondary structure
((((.((((..(((((((((((((((((((((((.((((((.....)))))).......))...))))))))))))))))))))).)))).))))
SIMILARITIES| miRBase tgu-let-7b: 3e-47 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 1e-34 | most similar mature miRNAs |
Identical with: tgu-let-7b from miRBase (MNEST026379) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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