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ABOUT THIS RECORD
ID:
MNEST006839
species:
Salmo salar
miRNA family:
miR-4198
source:
miRNEST
Taxonomy by NCBI:
Salmo salar
Salmo
Salmoninae
Salmonidae
Salmonoidei
Salmoniformes
Protacanthopterygii
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGATGTTATTTTAATGGAC
miRNA*
TCATTTATAACATTAACAA
mismatches:
4
bulges:
2
View larger
pre-miRNA
TCTGCTGTTTCCCGCTACAATAA
TCATTTATAACATTAACAA
TGTCTACACCGGATTTCTGATCAA
TTTGATGTTATTTTAATGGAC
AAAAAATGTGCTT
TTCTTTC
dot-bracket secondary structure
...((........))........
(((((.((((((((((((.
.((((.....))))...)).....
.))))))))))...)))))((
(.....)))....
.......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record