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ABOUT THIS RECORD
ID:
MNEST006860
species:
Salmo salar
miRNA family:
let-7
source:
miRNEST
Taxonomy by NCBI:
Salmo salar
Salmo
Salmoninae
Salmonidae
Salmonoidei
Salmoniformes
Protacanthopterygii
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAGGTAGTAGGTTGTATAGT
miRNA*
TATACAACTTACTGTCTTTCC
mismatches:
1
bulges:
0
View larger
pre-miRNA
GGGG
TGAGGTAGTAGGTTGTATAGT
TTTAGGGTCATACCCTTCCTGTCAGATAAC
TATACAACTTACTGTCTTTCC
T
dot-bracket secondary structure
.(((
.((((((((((((((((((((
(..(((((...)))))...........)))
)))))))))))))))))).))
)
SIMILARITIES
miRBase
tni-let-7a-2
:
5e-36
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
let-7: 1e-30
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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