miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST006863
species: Salmo salar
miRNA family: mir-375
source: miRNEST

Taxonomy by NCBI:
Salmo salar Salmo Salmoninae Salmonidae Salmonoidei Salmoniformes Protacanthopterygii Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTTGTTCGTTCGGCTCGCGT

miRNA*
GTTGAGCCATACGCACAATACC

mismatches: 4
bulges: 1

View larger
pre-miRNA
AATTGATTTTCTGTATTTGCCTCACGTTGAGCCATACGCACAATACCTGAAGATGAAGTTTTGTTCGTTCGGCTCGCGTTAAGCAGGTACAGATTTTCTA

dot-bracket secondary structure
)...((...(((((((((((...((((.(((((..(((.((((.((...........)).)))).)))..)))))))))...)))))))))))...))..


SIMILARITIES
miRBase fru-mir-375: 2.0E-26

PMRD no hits

microPC no hits
UniProt no hits

RFAM 5mir-375: 2.0E-21
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;