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ABOUT THIS RECORD
ID:
MNEST006863
species:
Salmo salar
miRNA family:
mir-375
source:
miRNEST
Taxonomy by NCBI:
Salmo salar
Salmo
Salmoninae
Salmonidae
Salmonoidei
Salmoniformes
Protacanthopterygii
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGTTCGTTCGGCTCGCGT
miRNA*
GTTGAGCCATACGCACAATACC
mismatches:
4
bulges:
1
View larger
pre-miRNA
ATTGATTTTCTGTATTTGCCTCAC
GTTGAGCCATACGCACAATACC
TGAAGATGAAG
TTTTGTTCGTTCGGCTCGCGT
TAAGCAGGTACAGATTTTCTA
dot-bracket secondary structure
...((...(((((((((((...((
((.(((((..(((.((((.((.
..........)
).)))).)))..)))))))))
...)))))))))))...))..
SIMILARITIES
miRBase
fru-mir-375
:
2e-26
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-375: 2e-21
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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