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ABOUT THIS RECORD

ID: MNEST006867
species: Salmo salar
miRNA family: miR-133a
source: miRNEST

Taxonomy by NCBI:
Salmo salar Salmo Salmoninae Salmonidae Salmonoidei Salmoniformes Protacanthopterygii Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTGGTAAAAAGGAACCAAAT

miRNA*
TTGGTCCCCTTCAACCAGCTG

mismatches: 4
bulges: 0

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pre-miRNA
AACACCTAATGCTTTGCTAAAGCTGGTAAAAAGGAACCAAATCACCTCTTGAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCTTTGATGAC

dot-bracket secondary structure
......(((.((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...)).))).....


SIMILARITIES
miRBase dre-mir-133a-1: 4e-40

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-133: 4e-25
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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