ABOUT THIS RECORDspecies: Caenorhabditis elegans
miRNA family: mir-1322
source: miRNEST
Taxonomy by NCBI:
Caenorhabditis elegans Caenorhabditis Peloderinae Rhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GATGCTGCTGCTGCTGCTGAA miRNA* CAGAAGGAGCAGCAGTACAAG mismatches: 5 bulges: 0 |
pre-miRNA
TCGGAAAGTCGTCAGAAGGAGCAGCAGTACAAGAGGAAGTTGTGAAGGGAGATAAAGTAATTGAAAAACCTAAAAGAAGAAAGTATGATCCAAAAAAAAA
GGCTGAAGAAGAGAAGGCAGCTGATGCTGCTGCTGCTGCTGAAGAAGTTGCA
dot-bracket secondary structure
....((..((.((((.((.((((((((((.....(((..(((((.(((......((....))......)))............)))))))).........
(((((............)))))..)))))))))).)).)))).))..))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TCGGAAAGTCGTCAGAAGGAGCAGCAGTACAAGAGGAAGTTGTGAAGGGAGATAAAGTAATTGAAAAACCTAAAAGAAGAAAGTATGATCCAAAAAAAAA
GGCTGAAGAAGAGAAGGCAGCTGATGCTGCTGCTGCTGCTGAAGAAGTTGCA
dot-bracket secondary structure
....((..((.((((.((.((((((((((.....(((..(((((.(((......((....))......)))............)))))))).........
(((((............)))))..)))))))))).)).)))).))..))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
