ABOUT THIS RECORDspecies: Canis lupus familiaris
miRNA family: miR-3473
source: miRNEST
Taxonomy by NCBI:
Canis lupus familiaris Canis lupus Canis Canidae Caniformia Carnivora Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAGAGATGGCTCAGTGGTT miRNA* TTACTGACTATTTCTCCAAC mismatches: 1 bulges: 1 |
pre-miRNA
TTAATAAATCTGTTAAATATATCATACTACCATTACTGACTATTTCTCCAACAGCTCTAAAATACCAGTAACTAACAGCATTTACATTGTACTGGGCATT
TTAAGGAAGCCACAGTTGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCC
dot-bracket secondary structure
((((((....))))))...............(((((((((((((((((((.(((((.((((((.((((((...................))))))..)))
))).((...))..))))).))))))))))).)))))))).(((((((.....)))))))..........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTAATAAATCTGTTAAATATATCATACTACCATTACTGACTATTTCTCCAACAGCTCTAAAATACCAGTAACTAACAGCATTTACATTGTACTGGGCATT
TTAAGGAAGCCACAGTTGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCC
dot-bracket secondary structure
((((((....))))))...............(((((((((((((((((((.(((((.((((((.((((((...................))))))..)))
))).((...))..))))).))))))))))).)))))))).(((((((.....)))))))..........
SIMILARITIES| miRBase mmu-mir-3473d: 0.000008 PMRD no hits microPC no hits | UniProt no hits RFAM U4: 2e-19 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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