ABOUT THIS RECORDspecies: Canis lupus familiaris
miRNA family: miR-1692
source: miRNEST
Taxonomy by NCBI:
Canis lupus familiaris Canis lupus Canis Canidae Caniformia Carnivora Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGTGGCTCAGTTGGTAGAGTA miRNA* CTTGATCTCTGGGTCGTAAG mismatches: 5 bulges: 1 |
pre-miRNA
AAAAAAAATAAGGGGCACCTGGGTGGCTCAGTTGGTAGAGTATGTGACCCTTGATCTCTGGGTCGTAAGTTTGAACCCCACATTGCA
dot-bracket secondary structure
...........((((...((..(((((((((..(((.(((.........))).))).))))))))).))......))))........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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AAAAAAAATAAGGGGCACCTGGGTGGCTCAGTTGGTAGAGTATGTGACCCTTGATCTCTGGGTCGTAAGTTTGAACCCCACATTGCA
dot-bracket secondary structure
...........((((...((..(((((((((..(((.(((.........))).))).))))))))).))......))))........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM tRNA: 0.000000000000005 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
