ABOUT THIS RECORDspecies: Canis lupus familiaris
miRNA family: mir-23
source: miRNEST
Taxonomy by NCBI:
Canis lupus familiaris Canis lupus Canis Canidae Caniformia Carnivora Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGGTTCCTGGCATGCTGATTT miRNA* ATCACATTGCCAGGGATTACCAC mismatches: 3 bulges: 2 |
pre-miRNA
CTCTGGCTGCTTGGGTTCCTGGCATGCTGATTTGTGACTTAAGATTAAAATCACATTGCCAGGGATTACCACGCATCCATG
dot-bracket secondary structure
...(((.(((.(((((((((((((...((((((..............))))))...))))))))))..))).))).)))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTCTGGCTGCTTGGGTTCCTGGCATGCTGATTTGTGACTTAAGATTAAAATCACATTGCCAGGGATTACCACGCATCCATG
dot-bracket secondary structure
...(((.(((.(((((((((((((...((((((..............))))))...))))))))))..))).))).)))..
SIMILARITIES| miRBase mml-mir-23b: 3e-37 PMRD no hits microPC no hits | UniProt no hits RFAM mir-23: 9e-26 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
