ABOUT THIS RECORDspecies: Canis lupus familiaris
miRNA family: mir-147
source: miRNEST
Taxonomy by NCBI:
Canis lupus familiaris Canis lupus Canis Canidae Caniformia Carnivora Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGTGCGGAAATGCTTCTGC miRNA* GGAAACATTGCTGCACAAAC mismatches: 3 bulges: 0 |
pre-miRNA
AGAGTACTCTATGAATCTAGTGGAAACATTGCTGCACAAACTAGATTATGGATACCAGTGTGCGGAAATGCTTCTGCTACATTTTTAGGGCTTGA
dot-bracket secondary structure
.((((..((((.((((.((((((((.((((.(((((((..(((.....))).......))))))).)))).)))))))).)))).))))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGAGTACTCTATGAATCTAGTGGAAACATTGCTGCACAAACTAGATTATGGATACCAGTGTGCGGAAATGCTTCTGCTACATTTTTAGGGCTTGA
dot-bracket secondary structure
.((((..((((.((((.((((((((.((((.(((((((..(((.....))).......))))))).)))).)))))))).)))).))))))))..
SIMILARITIES| miRBase cfa-mir-147: 1e-43 PMRD no hits microPC no hits | UniProt no hits RFAM mir-147: 6e-21 | most similar mature miRNAs |
Identical with: cfa-mir-147 from miRBase (MNEST026722) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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