ABOUT THIS RECORDspecies: Canis lupus familiaris
miRNA family: mir-208
source: miRNEST
Taxonomy by NCBI:
Canis lupus familiaris Canis lupus Canis Canidae Caniformia Carnivora Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATAAGACGAACAAAAGGTTTGT miRNA* AAGCTTTTTGCTCGCGTTATGT mismatches: 4 bulges: 0 |
pre-miRNA
CCCAGCTCCTTCTCCTCTCAGGGAAGCTTTTTGCTCGCGTTATGTTTCTCATCCGAATATAAGACGAACAAAAGGTTTGTCTGAGGGTAGAGTGCTCCCA
dot-bracket secondary structure
...(((...((((.((((((((.((((((((((.(((..((((((((.......))))))))..))).)))))))))).)))))))).)))).)))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
additional data
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CCCAGCTCCTTCTCCTCTCAGGGAAGCTTTTTGCTCGCGTTATGTTTCTCATCCGAATATAAGACGAACAAAAGGTTTGTCTGAGGGTAGAGTGCTCCCA
dot-bracket secondary structure
...(((...((((.((((((((.((((((((((.(((..((((((((.......))))))))..))).)))))))))).)))))))).)))).)))....
SIMILARITIES| miRBase rno-mir-208b: 5e-40 PMRD no hits microPC no hits | UniProt no hits RFAM mir-208: 7e-30 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
additional data
download this record
