ABOUT THIS RECORDspecies: Canis lupus familiaris
miRNA family: mir-208
source: miRNEST
Taxonomy by NCBI:
Canis lupus familiaris Canis lupus Canis Canidae Caniformia Carnivora Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAGCTTTTTGCTCGCGTTATG miRNA* TAAGACGAACAAAAGGTTTGT mismatches: 3 bulges: 0 |
pre-miRNA
CAGCTCCTTCTCCTCTCAGGGAAGCTTTTTGCTCGCGTTATGTTTCTCATCCGAATATAAGACGAACAAAAGGTTTGTCTGAGGGTAGAGTGCTCC
dot-bracket secondary structure
.(((...((((.((((((((.((((((((((.(((..((((((((.......))))))))..))).)))))))))).)))))))).)))).)))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CAGCTCCTTCTCCTCTCAGGGAAGCTTTTTGCTCGCGTTATGTTTCTCATCCGAATATAAGACGAACAAAAGGTTTGTCTGAGGGTAGAGTGCTCC
dot-bracket secondary structure
.(((...((((.((((((((.((((((((((.(((..((((((((.......))))))))..))).)))))))))).)))))))).)))).)))..
SIMILARITIES| miRBase rno-mir-208b: 7e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-208: 7e-30 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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