ABOUT THIS RECORDspecies: Canis lupus familiaris
miRNA family: mir-22
source: miRNEST
Taxonomy by NCBI:
Canis lupus familiaris Canis lupus Canis Canidae Caniformia Carnivora Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGTTCTTCAGTGGCAAGCTTT miRNA* AGCTGCCAGTTGAAGAACTGT mismatches: 0 bulges: 2 |
pre-miRNA
CTCATCTGGCTGAGCCGCAGTAGTTCTTCAGTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTCTGCCCCTGGCT
dot-bracket secondary structure
.......(((.(((..((((((((((((((((((((.((((((....(((...))).))))))))))).))))))))))))))).))).))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTCATCTGGCTGAGCCGCAGTAGTTCTTCAGTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTCTGCCCCTGGCT
dot-bracket secondary structure
.......(((.(((..((((((((((((((((((((.((((((....(((...))).))))))))))).))))))))))))))).))).))).......
SIMILARITIES| miRBase mmu-mir-22: 8e-48 PMRD no hits microPC no hits | UniProt no hits RFAM mir-22: 9e-42 | most similar mature miRNAs |
Identical with: mne-mir-22 from miRBase (MNEST028181) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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