ABOUT THIS RECORDspecies: Physcomitrella patens
miRNA family: MIR902
source: miRNEST
Taxonomy by NCBI:
Physcomitrella patens Physcomitrella Funariaceae Funariales Funariidae Bryopsida Moss Superclass V Bryophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACGAAGGTCTGCATCATAGCC miRNA* CTATGATGCAGATTCTTCATCT mismatches: 3 bulges: 1 |
pre-miRNA
GCCTTCCTCTAGCCTATGATGCAGATTCTTCATCTGTTTGTTATCGTTCTCATGGTGTACATAACAGACGAAGGTCTGCATCATAGCCAAGAGGAAG
dot-bracket secondary structure
).((((((((...(((((((((((((.((((.(((((((((((((((....)))))).))).)))))).)))))))))))))))))...))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCCTTCCTCTAGCCTATGATGCAGATTCTTCATCTGTTTGTTATCGTTCTCATGGTGTACATAACAGACGAAGGTCTGCATCATAGCCAAGAGGAAG
dot-bracket secondary structure
).((((((((...(((((((((((((.((((.(((((((((((((((....)))))).))).)))))).)))))))))))))))))...))))))))
SIMILARITIES| miRBase ppt-MIR902b: 1.0E-49 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: ppt-MIR902b from miRBase (MNEST039547) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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