ABOUT THIS RECORDspecies: Physcomitrella patens
miRNA family: miR861-3p
source: miRNEST
Taxonomy by NCBI:
Physcomitrella patens Physcomitrella Funariaceae Funariales Funariidae Bryopsida Moss Superclass V Bryophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CATGGAGATGTCTTCAAGGTG miRNA* TCGCAAGGGCATCTTTCAGATA mismatches: 5 bulges: 1 |
pre-miRNA
CTTATCCAAGAGTCACAAAACAGCTGTACTACATGGAGATGTCTTCAAGGTGCAGAGATGAGATTTTAGGAAATCAAAGTTGTGAACCAAAATCTTGCAT
CGCAAGGGCATCTTTCAGATAGTCATTCAGCTGCTTTCGGCACTCAGCA
dot-bracket secondary structure
.........((((...(((.((((((.((((..((((((((((((...((((((......(((((((.((...(((......))).))))))))))))))
)...)))))))).))))..))))....)))))).)))....))))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTTATCCAAGAGTCACAAAACAGCTGTACTACATGGAGATGTCTTCAAGGTGCAGAGATGAGATTTTAGGAAATCAAAGTTGTGAACCAAAATCTTGCAT
CGCAAGGGCATCTTTCAGATAGTCATTCAGCTGCTTTCGGCACTCAGCA
dot-bracket secondary structure
.........((((...(((.((((((.((((..((((((((((((...((((((......(((((((.((...(((......))).))))))))))))))
)...)))))))).))))..))))....)))))).)))....))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
