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ABOUT THIS RECORD
ID:
MNEST007002
species:
Physcomitrella patens
miRNA family:
MIRf226
source:
miRNEST
Taxonomy by NCBI:
Physcomitrella patens
Physcomitrella
Funariaceae
Funariales
Funariidae
Bryopsida
Moss Superclass V
Bryophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCTTGGGTGATGCTGATTAAT
miRNA*
TACTCTCTTACTTGAGCTT
mismatches:
3
bulges:
2
View larger
pre-miRNA
TGGGAGCGATG
GCTTGGGTGATGCTGATTAAT
CATGGGCACTAGAT
TACTCTCTTACTTGAGCTT
TTAAAGTC
dot-bracket secondary structure
.......((.(
((((((((((....((.((((
(.(((...))))))
)).))..))))))))))).
))......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record