ABOUT THIS RECORD

ID: MNEST007018
species: Ictalurus punctatus
miRNA family: mir-1322
source: miRNEST

Taxonomy by NCBI:
Ictalurus punctatus Ictalurus Ictaluridae Siluriformes Siluriphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
GCCATCGGCGAGCTGTAGCCGTAGTGCATCACCTGCTCGTACGTTTTCAGGTCCATTTTGTGGTGATGCTGCTGCTCGGACGACATAAGGTTGTTGATGG
AGAACGGGTGGTTGAAAGCGTAGTGGTGATCTGGCTTCAAGTGCGCGTCGTGCGCAAGAACCGCGTGGTGCTGCGCCATTAGATGCTGCTGCTGCTGCTG
CTGTTGGTGGT

dot-bracket secondary structure
(((((((((.(((.(((((.((((((((((..((((((((...((((((.((((.....(((((......)))))..))))((((......))))..)))
))))))))))).(((..((((((((.((...(((.(((...(((((.....))))).))))))..)).))))))))..)))))))).))))).))))).)
)))))))))))


SIMILARITIES

miRBase no hits PMRD no hits microPC no hits

UniProt sp|Q07342|FOXA2_DANRE: 2e-20 RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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