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ABOUT THIS RECORD

ID: MNEST007039
species: Ictalurus punctatus
miRNA family: mir-99
source: miRNEST

Taxonomy by NCBI:
Ictalurus punctatus Ictalurus Ictaluridae Siluriformes Siluriphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AACCCGTAGATCCGATCTTGT

miRNA*
AAGCTCGTCTCTATGGGTCCC

mismatches: 4
bulges: 0

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pre-miRNA
CACTTGTCATTAACCCGTAGATCCGATCTTGTGCTACTTAACAACGCAAGCTCGTCTCTATGGGTCCCTGTCTCTG

dot-bracket secondary structure
............(((((((((..(((.((((((...........)))))).)))..)))))))))...........


SIMILARITIES
miRBase dre-mir-99-1: 0.000000000004

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-10: 0.00000002
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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