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ABOUT THIS RECORD
ID:
MNEST007040
species:
Ictalurus punctatus
miRNA family:
miR-2444
source:
miRNEST
Taxonomy by NCBI:
Ictalurus punctatus
Ictalurus
Ictaluridae
Siluriformes
Siluriphysi
Otophysi
Ostariophysi
Otocephala
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGGGTTGTTTTTTGTTTTT
miRNA*
CAATAAAAGTCACATTCGAGC
mismatches:
5
bulges:
0
View larger
pre-miRNA
ACTGTTTTTGT
TTTGGGTTGTTTTTTGTTTTT
TTTTACACGTTTTCGTTGTTAATAATCCGTGTACTGTGCTAAACTGGCAGCGAAG
CAATAAAAGTCAC
ATTCGAGC
AAAAAAA
dot-bracket secondary structure
....(((((((
((.((..((.((((((((.((
((.((((((..................))))))...((((.....))))..))))
.)))))))).)).
.)).))))
)))))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record